Hi Mike! RE flywheel: there was definitely no ridges, it was relatively smooth. Unfortunately I didn't take pictures nor remember if there was any glazing or hot spots.
I did replace all u-joints on the propeller shaft and output shafts and checked bearings and replaced bad ones on the rear passenger side. I did have one u-joint go in too easy into one of the "ears" of the propeller shaft, I'll double check if there is any slop.
Yup, lug bolts are def tight, which it would have been something as simple as this.
The diff had actually not been firmly bolted at one point, but thats been taken care off a few months back. You can see the gap there was before:
Good point on the shocks, I'll check them out now that the weather is getting better here in the bay area. The coil over springs are def still good.
I'll also try and open the diff while its still bolted to the car and see if I can measure the backlash, something similar to this video:
It seems that the more the backlash, the worse the clutch chatter.
Thanks for the tips!